U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX11450673: Agave fourcroydes root biological replicate 3
1 ILLUMINA (Illumina HiSeq 4000) run: 26.4M spots, 2.6G bases, 968.2Mb downloads

Design: The libraries were prepared using the KAPA Stranded mRNA-Seq kit (07962193001) for Illumina platforms following the manufacturer's protocol. Transcripts insert sizes of 150-180 bp were used. Libraries were separated into two pools and each pool was sequenced in a single lane, generating 50bp paired-end reads.
Submitted by: University of Campinas
Study: Transcriptional profiling of three abandoned Agave cultivars
PRJNA746623 • SRP328392 • All experiments • All runs
show Abstracthide Abstract
Transcriptome of A. sisalana, A. fourcroydes, and Agave hybrid 11648 ((A. amaniensis x A. angustifolia) x A. amaniensis) (H11648) growing under field conditions without irrigation for 7 years in non-calcic brown soil and semi-arid climate. For all cultivars, leaf (central fraction of the proximal-distal axis), root, and stem were sampled at noon. Leaf maturity equivalency was maintained by sampling only the fifth leaf counted from the central spike of each plant.
Sample: FTRL-9
SAMN20229224 • SRS9491099 • All experiments • All runs
Organism: Agave fourcroydes
Library:
Name: FTRL_9
Instrument: Illumina HiSeq 4000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: Oligo-dT
Layout: PAIRED
Runs: 1 run, 26.4M spots, 2.6G bases, 968.2Mb
Run# of Spots# of BasesSizePublished
SRR1514321926,424,3232.6G968.2Mb2021-12-07

ID:
15315772

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...